aboutsummaryrefslogtreecommitdiff
path: root/nerv/nn/network.lua
blob: 01290e704dd068e09a41a1463e3f6012542e3590 (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
local network = nerv.class('nerv.Network')

function network:__init(id, global_conf, network_conf)
    self.id = id
    self.dim_in = network_conf.network.dim_in
    self.dim_out = network_conf.network.dim_out
    self.gconf = global_conf
    if self.gconf.use_cpu then
        self.mat_type = self.gconf.mmat_type
    else
        self.mat_type = self.gconf.cumat_type
    end
    self.clip = network_conf.clip
    self.nn_act_default = network_conf.nn_act_default
    if self.nn_act_default == nil then
        self.nn_act_default = 0
    end
    self.layers = {}
    self.input_conn = {}
    self.output_conn = {}
    self.socket = self:compile(network_conf.network)
    for i = 1, #self.dim_in do
        local edge = self.socket.inputs[i]
        local id, port, time = edge[1], edge[2], edge[3]
        if self.input_conn[id][port] ~= nil then
            nerv.error('duplicate edge')
        end
        self.input_conn[id][port] = {0, i, time}
    end
    for i = 1, #self.dim_out do
        local edge = self.socket.outputs[i]
        local id, port, time = edge[1], edge[2], edge[3]
        if self.output_conn[id][port] ~= nil then
            nerv.error('duplicate edge')
        end
        self.output_conn[id][port] = {0, i, time}
    end
    self.delay = 0
    for i = 1, #self.layers do
        local dim_in, _ = self.layers[i]:get_dim()
        for j = 1, #dim_in do
            local time = self.input_conn[i][j][3]
            if math.abs(time) > self.delay then
                self.delay = math.abs(time)
            end
        end
    end
end

function network:compile(layer)
    local socket = {inputs = {}, outputs = {}}
    if not nerv.is_type(layer, 'nerv.GraphLayer') then
        table.insert(self.layers, layer)
        local id = #self.layers
        self.input_conn[id] = {}
        self.output_conn[id] = {}
        local dim_in, dim_out = layer:get_dim()
        for i = 1, #dim_in do
            socket.inputs[i] = {id, i, 0}
        end
        for i = 1, #dim_out do
            socket.outputs[i] = {id, i, 0}
        end
    else
        local sublayer_socket = {}
        for id, sublayer in pairs(layer.layers) do
            if id ~= '<input>' then
               sublayer_socket[sublayer.id] = self:compile(sublayer.layer)
            end
        end
        for _, edge in pairs(layer.connections) do
            -- id = 0 means <input> or <output>
            local id_from, port_from = edge[1], edge[2]
            local id_to, port_to = edge[3], edge[4]
            local time = edge[5]
            if id_from == 0 then
                if socket.inputs[port_from] ~= nil then
                    nerv.error('duplicate input socket')
                end
                local input = sublayer_socket[id_to].inputs[port_to]
                local id, port, t = input[1], input[2], input[3] + time
                socket.inputs[port_from] = {id, port, t}
            else
                local output = sublayer_socket[id_from].outputs[port_from]
                local id, port, t = output[1], output[2], output[3] + time
                if id_to == 0 then
                    if socket.outputs[port_to] ~= nil then
                        nerv.error('duplicate output socket')
                    end
                    socket.outputs[port_to] = {id, port, t}
                else
                    local input = sublayer_socket[id_to].inputs[port_to]
                    local id1, port1, t1 = input[1], input[2], input[3]
                    if self.input_conn[id1][port1] ~= nil or self.output_conn[id][port] ~= nil then
                        nerv.error('duplicate edge')
                    end
                    self.input_conn[id1][port1] = {id, port, t + t1}
                    self.output_conn[id][port] = {id1, port1, t + t1}
                end
            end
        end
    end
    return socket
end

function network:init(batch_size, chunk_size)
    self.batch_size = batch_size
    self.chunk_size = chunk_size

    self:topsort()
    
    self:make_initial_store()
    collectgarbage('collect')
end

function network:topsort()
    nerv.info('Network topology sort')
    local degree = {}
    for t = 1, self.chunk_size do
        degree[t] = {}
        for i = 1, #self.layers do  
            degree[t][i] = 0
        end
    end

    for t = 1, self.chunk_size do
        for i = 1, #self.layers do
            local _, dim_out = self.layers[i]:get_dim()
            for j = 1, #dim_out do
                if self.output_conn[i][j] ~= nil then
                    local edge = self.output_conn[i][j]
                    local id, _, time = edge[1], edge[2], edge[3] + t
                    if time >= 1 and time <= self.chunk_size and id ~= 0 then
                        degree[time][id] = degree[time][id] + 1
                    end
                end
            end
        end
    end

    self.queue = {}
    local l = 1
    local r = 0
    for t = 1, self.chunk_size do
        for i = 1, #self.layers do
            if degree[t][i] == 0 then
                r = r + 1
                self.queue[r] = {chunk = t, id = i}
            end
        end
    end
    while l<=r do
        local t, i = self.queue[l].chunk, self.queue[l].id
        l = l + 1
        local _, dim_out = self.layers[i]:get_dim()
        for j = 1, #dim_out do
            if self.output_conn[i][j] ~= nil then
                local edge = self.output_conn[i][j]
                local id, _, time = edge[1], edge[2], edge[3] + t
                if time >= 1 and time <= self.chunk_size and id ~= 0 then
                    degree[time][id] = degree[time][id] - 1
                    if degree[time][id] == 0 then
                        r = r + 1
                        self.queue[r] = {chunk = time, id = id}
                    end
                end
            end
        end
    end

    if r ~= self.chunk_size * #self.layers then
        nerv.error('loop detected')
    end
end

function network:make_initial_store()
    nerv.info('Network initing storage')

    -- allocate memory
    local memory = {}
    local err_memory = {}
    for t = 1 - self.delay, self.chunk_size + self.delay do
        memory[t] = {}
        err_memory[t] = {}
        for i = 1, #self.layers do
            memory[t][i] = {}
            err_memory[t][i] = {}
            local dim_in, dim_out = self.layers[i]:get_dim()
            for j = 1, #dim_in do
                err_memory[t][i][j] = self.mat_type(self.batch_size, dim_in[j])
                err_memory[t][i][j]:fill(0)
            end
            for j = 1, #dim_out do
                memory[t][i][j] = self.mat_type(self.batch_size, dim_out[j])
                memory[t][i][j]:fill(self.nn_act_default)
            end
        end
        -- memory[t][0] stores network input
        memory[t][0] = {}
        for j = 1, #self.dim_in do
            memory[t][0][j] = self.mat_type(self.batch_size, self.dim_in[j])
            memory[t][0][j]:fill(self.nn_act_default)
        end
        -- err_memory[t][0] stores network err_input
        err_memory[t][0] = {}
        for j = 1, #self.dim_out do
            err_memory[t][0][j] = self.mat_type(self.batch_size, self.dim_out[j])
            err_memory[t][0][j]:fill(0)
        end
    end

    -- connect memory and reference 
    self.input = {}
    self.output = {}
    self.err_input = {}
    self.err_output = {}
    for t = 1, self.chunk_size do
        self.input[t] = {}
        self.output[t] = {}
        self.err_input[t] = {}
        self.err_output[t] = {}
        for i = 1, #self.layers do
            self.input[t][i] = {}
            self.output[t][i] = {}
            self.err_input[t][i] = {}
            self.err_output[t][i] = {}
            local dim_in, dim_out = self.layers[i]:get_dim()
            for j = 1, #dim_in do
                local edge = self.input_conn[i][j]
                local id, port, time = edge[1], edge[2], edge[3]
                if id ~= 0 or t - time < 1 or t - time > self.chunk_size then
                    self.input[t][i][j] = memory[t - time][id][port]
                end
                if id ~= 0 then