# The Nerv NN Package
Part of the [Nerv](../README.md) toolkit.
## Description
### Class hierarchy
it contains __nerv.LayerRepo__, __nerv.ParamRepo__, and __nerv.DAGLayer__(inherits __nerv.Layer__).
### Class hierarchy and their members
#### nerv.ParamRepo
Get parameter object by ID.
* `table param_table` Contains the mapping of parameter ID to parameter file(__nerv.ChunkFile__)
* __nerv.LayerRepo__ Get layer object by ID.
* `table layers` Contains the mapping of layer ID to layer object.
objects.
#### __nerv.DAGLayer__
Inherits __nerv.Layer__.
* `layers`: __table__, a mapping from a layer ID to its "ref". A ref is a structure that contains reference to space allocations and other info of the layer.
* `inputs`: __table__, a mapping from the inputs ports of the DAG layer to the input ports of the sublayer, the key is the port number, the value is `{ref, port}`.
* `outputs`:__table__, the counterpart of `inputs`.
* `parsed_conn`: __table__, a list of parsed connections, each entry is of format `{{ref_from, port_from}, {ref_to, port_to}}`.
* `queue`: __table__, a list of "ref"s, the propagation of the DAGLayer will follow this order, and back-propagation will follow a reverse order.
## Methods
### __nerv.ParamRepo__
#### nerv.ParamRepo:\_\_init(param\_files)
* Parameters:
`param_files`: __table__
* Description:
`param_files` is a list of file names that stores parameters, the newed __ParamRepo__ will read them from file and store the mapping for future fetching.
#### nerv.Param ParamRepo.get_param(ParamRepo self, string pid, table global_conf)
* Returns:
__nerv.Layer__
* Parameters:
`self`: __nerv.ParamRepo__.
`pid`: __string__.
`global_conf`: __table__.
* Description:
__ParamRepo__ will find the __nerv.ChunkFile__ `pf` that contains parameter of ID `pid` and return `pf:read_chunk(pid, global_conf)`.
### __nerv.LayerRepo__
#### nerv.LayerRepo:\_\_init(layer\_spec, param\_repo, global\_conf)
* Returns:
__nerv.LayerRepo__.
* Parameters:
`self`: __nerv.ParamRepo__.
`layer_spec`: __table__.
`param_repo`: __nerv.ParamRepo__.
`global_conf`: __table__.
* Description:
__LayerRepo__ will construct the layers specified in `layer_spec`. Every entry in the `layer_spec` table should follow the format below:
> layer_spec : {[layer_type1] = llist1, [layer_type2] = llist2, ...}
> llist : {layer1, layer2, ...}
> layer : layerid = {param_config, layer_config}
> param_config : {param1 = paramID1, param2 = paramID2}
__LayerRepo__ will merge `param_config` into `layer_config` and construct a layer by calling `layer_type(layerid, global_conf, layer_config)`.
#### nerv.LayerRepo.get\_layer(self, lid)
* Returns:
__nerv.LayerRepo__, the layer with ID `lid`.
* Parameters:
`self`:__nerv.LayerRepo__.
`lid`:__string__.
* Description:
Returns the layer with ID `lid`.
### nerv.DAGLayer
#### nerv.DAGLayer:\_\_init(id, global\_conf, layer\_conf)
* Returns:
__nerv.DAGLayer__
* Parameters:
`id`: __string__
`global_conf`: __table__
`layer_conf`: __table__
* Description:
The `layer_conf` should contain `layer_conf.sub_layers` which is a __nerv.LayerRepo__ storing the sub layers of the DAGLayer. It should also contain `layer_conf.connections`, which is a string-to-string mapping table describing the DAG connections. See an example below:
```
dagL = nerv.DAGLayer("DAGL", global_conf, {["dim_in"] = {input_dim, 2}, ["dim_out"] = {}, ["sub_layers"] = layerRepo,
["connections"] = {
["<input>[1]"] = "AffineL[1]",
["AffineL[1]"] = "SoftmaxL[1]",
["<input>[2]"] = "SoftmaxL[2]",
}})
```
#### nerv.DAGLayer.init(self, batch\_size)
* Parameters:
`self`: __nerv.DAGLayer__
`batch_size`: __int__
* Description:
This initialization method will allocate space for output and input matrice, and will call `init()` for each of its sub layers.
#### nerv.DAGLayer.propagate(self, input, output)
* Parameters:
`self`: __nerv.DAGLayer__
`input`: __table__
`output`: __table__
* Description:
The same function as __nerv.Layer.propagate__, do propagation for each layer in the order of `self.queue`.
#### nerv.DAGLayer.back\_propagate(self, next\_bp\_err, bp\_err, input, output)
* Parameters:
`self`: __nerv.DAGLayer__
`next_bp_err`: __table__
`bp_err`: __table__
`input`: __table__
`output`: __table__
* Description:
The same function as __nerv.Layer.back_propagate__, do back-propagation for each layer in the reverse order of `self.queue`.
#### nerv.DAGLayer.update(self, bp\_err, input, output)
* Parameters:
`self`: __nerv.DAGLayer__
`bp_err`: __table__
`input`: __table__
`output`: __table__
* Description:
The same function as __nerv.Layer.update__, do update for each layer in the order of `self.queue`.
## Examples
* aaa
```
require 'math'
require 'layer.affine'
require 'layer.softmax_ce'
--[[Example using DAGLayer, a simple two-classification problem]]--
--[[begin global setting and data generation]]--
global_conf = {lrate = 10,
wcost = 1e-6,
momentum = 0.9,
cumat_type = nerv.CuMatrixFloat,
}
input_dim = 5
data_num = 100
param_fn = "../tmp"
ansV = nerv.CuMatrixFloat(input_dim, 1)
for i = 0, input_dim - 1, 1 do
ansV[i][0] = math.random() - 0.5
end
ansB = math.random() - 0.5
print('displaying ansV')
print(ansV)
print('displaying ansB(bias)')
print(ansB)
dataM = nerv.CuMatrixFloat(data_num, input_dim)
for i = 0, data_num - 1, 1 do
for j = 0, input_dim - 1, 1 do
dataM[i][j] = math.random() * 2 - 1
end
end
refM = nerv.CuMatrixFloat(data_num, 1)
refM:fill(ansB)
refM:mul(dataM, ansV, 1, 1) --refM = dataM * ansV + ansB
labelM = nerv.CuMatrixFloat(data_num, 2)
for i = 0, data_num - 1, 1 do
if (refM[i][0] > 0) then
labelM[i][0] = 1
labelM[i][1] = 0
else
labelM[i][0] = 0
labelM[i][1] = 1
end
end
--[[global setting and data generation end]]--
--[[begin network building]]--
--parameters
do
local affineL_ltp = nerv.LinearTransParam('AffineL_ltp', global_conf)
affineL_ltp.trans = nerv.CuMatrixFloat(input_dim, 2)
for i = 0, input_dim - 1, 1 do
for j = 0, 1, 1 do
affineL_ltp.trans[i][j] = math.random() - 0.5
end
end
local affineL_bp = nerv.BiasParam('AffineL_bp', global_conf)
affineL_bp.trans = nerv.CuMatrixFloat(1, 2)
for j = 0, 1, 1 do
affineL_bp.trans[j] = math.random() - 0.5
end
local chunk = nerv.ChunkFile(param_fn, 'w')
chunk:write_chunk(affineL_ltp)
chunk:write_chunk(affineL_bp)
chunk:close()
paramRepo = nerv.ParamRepo({param_fn})
end
--layers
layerRepo = nerv.LayerRepo({
["nerv.AffineLayer"] =
{
["AffineL"] = {{["ltp"] = "AffineL_ltp", ["bp"] = "AffineL_bp"}, {["dim_in"] = {input_dim}, ["dim_out"] = {2}}},
},
["nerv.SoftmaxCELayer"] =
{
["SoftmaxL"] = {{}, {["dim_in"] = {2, 2}, ["dim_out"] = {}}}
},
}, paramRepo, global_conf)
affineL = layerRepo:get_layer("AffineL")
softmaxL = layerRepo:get_layer("SoftmaxL")
print('layers initializing...')
dagL = nerv.DAGLayer("DAGL", global_conf, {["dim_in"] = {input_dim, 2}, ["dim_out"] = {}, ["sub_layers"] = layerRepo,
["connections"] = {
["<input>[1]"] = "AffineL[1]",
["AffineL[1]"] = "SoftmaxL[1]",
["<input>[2]"] = "SoftmaxL[2]",
}})
dagL:init(data_num)
--affineL:init()
--softmaxL:init()
--[[network building end]]--
--[[begin space allocation]]--
print('network input&output&error space allocation...')
dagL_input = {dataM, labelM}
dagL_output = {}
dagL_err = {}
dagL_ierr = {nerv.CuMatrixFloat(data_num, input_dim), nerv.CuMatrixFloat(data_num, 2)}
--[[space allocation end]]--
--[[begin training]]--
ce_last = 0
for l = 0, 10, 1 do
dagL:propagate(dagL_input, dagL_output)
dagL:back_propagate(dagL_ierr, dagL_err, dagL_input, dagL_output)
dagL:update(dagL_err, dagL_input, dagL_output)
if (l % 2 == 0) then
nerv.utils.printf("training iteration %d finished\n", l)
nerv.utils.printf("cross entropy: %.8f\n", softmaxL.total_ce - ce_last)
--nerv.utils.printf("accurate labels: %d\n", calculate_accurate(output, labelM))
nerv.utils.printf("total frames processed: %.8f\n", softmaxL.total_frames)
end
ce_last = softmaxL.total_ce
end
--[[end training]]--
```