init project pages

30 files changed, 3533 insertions, 0 deletions

diff --git a/.buildinfo b/.buildinfo
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--- /dev/null
+++ b/.buildinfo
@@ -0,0 +1,4 @@
+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 3396a52430fb411caaf456792ec97299
+tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/_sources/dev.txt b/_sources/dev.txt
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--- /dev/null
+++ b/_sources/dev.txt
@@ -0,0 +1,3 @@
+Development Manual
+==================
+To be filled.
diff --git a/_sources/index.txt b/_sources/index.txt
new file mode 100644
index 0000000..e55892b
--- /dev/null
+++ b/_sources/index.txt
@@ -0,0 +1,47 @@
+.. Nerv documentation master file, created by
+   sphinx-quickstart on Thu Jun 25 19:40:07 2015.
+   You can adapt this file completely to your liking, but it should at least
+   contain the root `toctree` directive.
+
+Welcome to Nerv's documentation!
+================================
+
+Contents:
+
+.. toctree::
+   :maxdepth: 2
+
+   user
+   dev
+
+TODO List
+---------
+
++----------+--------------------------------------------------------------------------+-------------+
+| Status/  | Task                                                                     | Assignee    |
+| Priority |                                                                          |             |
++==========+==========================================================================+=============+
+| High     | Generalize nerv.Matrix to nerv.Tensor (use the same API as Torch Tensor) | Ted Yin     |
++----------+--------------------------------------------------------------------------+-------------+
+| High     | Development manual: coding style & contribution rules                    | Ted Yin     |
++----------+--------------------------------------------------------------------------+-------------+
+| High     | Development manual: Error reporting & Logging standard                   | Ted Yin     |
++----------+--------------------------------------------------------------------------+-------------+
+| High     | support for basic RNN                                                    | Tianxing He |
++----------+--------------------------------------------------------------------------+-------------+
+| High     | support for RNN/LSTM                                                     | Tianxing He |
++----------+--------------------------------------------------------------------------+-------------+
+| Mid      | support for CNN                                                          | ? (Ted Yin) |
++----------+--------------------------------------------------------------------------+-------------+
+| Mid      | User manual                                                              | ALL         |
++----------+--------------------------------------------------------------------------+-------------+
+| Low      | Development manual: general reference                                    | N/A         |
++----------+--------------------------------------------------------------------------+-------------+
+
+Indices and tables
+==================
+
+* :ref:`genindex`
+* :ref:`modindex`
+* :ref:`search`
+
diff --git a/_sources/user.txt b/_sources/user.txt
new file mode 100644
index 0000000..eb4b53c
--- /dev/null
+++ b/_sources/user.txt
@@ -0,0 +1,3 @@
+User Manual
+===========
+To be filled.
diff --git a/_static/ajax-loader.gif b/_static/ajax-loader.gif
new file mode 100644
index 0000000..61faf8c
--- /dev/null
+++ b/_static/ajax-loader.gif
diff --git a/_static/alabaster.css b/_static/alabaster.css
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index 0000000..6316818
--- /dev/null
+++ b/_static/alabaster.css
@@ -0,0 +1,579 @@
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+@import url("basic.css");
+
+/* -- page layout ----------------------------------------------------------- */
+
+body {
+    font-family: 'goudy old style', 'minion pro', 'bell mt', Georgia, 'Hiragino Mincho Pro';
+    font-size: 17px;
+    background-color: white;
+    color: #000;
+    margin: 0;
+    padding: 0;
+}
+
+div.document {
+    width: 940px;
+    margin: 30px auto 0 auto;
+}
+
+div.documentwrapper {
+    float: left;
+    width: 100%;
+}
+
+div.bodywrapper {
+    margin: 0 0 0 220px;
+}
+
+div.sphinxsidebar {
+    width: 220px;
+}
+
+hr {
+    border: 1px solid #B1B4B6;
+}
+
+div.body {
+    background-color: #ffffff;
+    color: #3E4349;
+    padding: 0 30px 0 30px;
+}
+
+div.footer {
+    width: 940px;
+    margin: 20px auto 30px auto;
+    font-size: 14px;
+    color: #888;
+    text-align: right;
+}
+
+div.footer a {
+    color: #888;
+}
+
+div.related {
+    display: none;
+}
+
+div.sphinxsidebar a {
+    color: #444;
+    text-decoration: none;
+    border-bottom: 1px dotted #999;
+}
+
+div.sphinxsidebar a:hover {
+    border-bottom: 1px solid #999;
+}
+
+div.sphinxsidebar {
+    font-size: 14px;
+    line-height: 1.5;
+}
+
+div.sphinxsidebarwrapper {
+    padding: 18px 10px;
+}
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+div.sphinxsidebarwrapper p.logo {
+    padding: 0;
+    margin: -10px 0 0 0px;
+    text-align: center;
+}
+
+div.sphinxsidebarwrapper h1.logo {
+    margin-top: -10px;
+    text-align: center;
+    margin-bottom: 5px;
+    text-align: left;
+}
+
+div.sphinxsidebarwrapper h1.logo-name {
+    margin-top: 0px;
+}
+
+div.sphinxsidebarwrapper p.blurb {
+    margin-top: 0;
+}
+
+div.sphinxsidebar h3,
+div.sphinxsidebar h4 {
+    font-family: 'Garamond', 'Georgia', serif;
+    color: #444;
+    font-size: 24px;
+    font-weight: normal;
+    margin: 0 0 5px 0;
+    padding: 0;
+}
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+div.sphinxsidebar h4 {
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+div.sphinxsidebar h3 a {
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+}
+
+div.sphinxsidebar p.logo a,
+div.sphinxsidebar h3 a,
+div.sphinxsidebar p.logo a:hover,
+div.sphinxsidebar h3 a:hover {
+    border: none;
+}
+
+div.sphinxsidebar p {
+    color: #555;
+    margin: 10px 0;
+}
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+div.sphinxsidebar ul {
+    margin: 10px 0;
+    padding: 0;
+    color: #000;
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+div.sphinxsidebar input {
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+    font-family: 'Georgia', serif;
+    font-size: 1em;
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+div.sphinxsidebar hr {
+    border: none;
+    height: 1px;
+    color: #999;
+    background: #999;
+
+    text-align: left;
+    margin-left: 0;
+    width: 50%;
+}
+
+/* -- body styles ----------------------------------------------------------- */
+
+a {
+    color: #004B6B;
+    text-decoration: underline;
+}
+
+a:hover {
+    color: #6D4100;
+    text-decoration: underline;
+}
+
+div.body h1,
+div.body h2,
+div.body h3,
+div.body h4,
+div.body h5,
+div.body h6 {
+    font-family: 'Garamond', 'Georgia', serif;
+    font-weight: normal;
+    margin: 30px 0px 10px 0px;
+    padding: 0;
+}
+
+div.body h1 { margin-top: 0; padding-top: 0; font-size: 240%; }
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+div.body h4 { font-size: 130%; }
+div.body h5 { font-size: 100%; }
+div.body h6 { font-size: 100%; }
+
+a.headerlink {
+    color: #DDD;
+    padding: 0 4px;
+    text-decoration: none;
+}
+
+a.headerlink:hover {
+    color: #444;
+    background: #EAEAEA;
+}
+
+div.body p, div.body dd, div.body li {
+    line-height: 1.4em;
+}
+
+div.admonition {
+    margin: 20px 0px;
+    padding: 10px 30px;
+    background-color: #FCC;
+    border: 1px solid #FAA;
+}
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+div.admonition tt.xref, div.admonition a tt {
+    border-bottom: 1px solid #fafafa;
+}
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+dd div.admonition {
+    margin-left: -60px;
+    padding-left: 60px;
+}
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+div.admonition p.admonition-title {
+    font-family: 'Garamond', 'Georgia', serif;
+    font-weight: normal;
+    font-size: 24px;
+    margin: 0 0 10px 0;
+    padding: 0;
+    line-height: 1;
+}
+
+div.admonition p.last {
+    margin-bottom: 0;
+}
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+div.highlight {
+    background-color: white;
+}
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+dt:target, .highlight {
+    background: #FAF3E8;
+}
+
+div.note {
+    background-color: #EEE;
+    border: 1px solid #CCC;
+}
+
+div.seealso {
+    background-color: #ffc;
+    border: 1px solid #ff6;
+}
+
+div.topic {
+    background-color: #eee;
+}
+
+p.admonition-title {
+    display: inline;
+}
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+p.admonition-title:after {
+    content: ":";
+}
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+pre, tt {
+    font-family: 'Consolas', 'Menlo', 'Deja Vu Sans Mono', 'Bitstream Vera Sans Mono', monospace;
+    font-size: 0.9em;
+}
+
+img.screenshot {
+}
+
+tt.descname, tt.descclassname {
+    font-size: 0.95em;
+}
+
+tt.descname {
+    padding-right: 0.08em;
+}
+
+img.screenshot {
+    -moz-box-shadow: 2px 2px 4px #eee;
+    -webkit-box-shadow: 2px 2px 4px #eee;
+    box-shadow: 2px 2px 4px #eee;
+}
+
+table.docutils {
+    border: 1px solid #888;
+    -moz-box-shadow: 2px 2px 4px #eee;
+    -webkit-box-shadow: 2px 2px 4px #eee;
+    box-shadow: 2px 2px 4px #eee;
+}
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+table.docutils td, table.docutils th {
+    border: 1px solid #888;
+    padding: 0.25em 0.7em;
+}
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+table.field-list, table.footnote {
+    border: none;
+    -moz-box-shadow: none;
+    -webkit-box-shadow: none;
+    box-shadow: none;
+}
+
+table.footnote {
+    margin: 15px 0;
+    width: 100%;
+    border: 1px solid #EEE;
+    background: #FDFDFD;
+    font-size: 0.9em;
+}
+
+table.footnote + table.footnote {
+    margin-top: -15px;
+    border-top: none;
+}
+
+table.field-list th {
+    padding: 0 0.8em 0 0;
+}
+
+table.field-list td {
+    padding: 0;
+}
+
+table.footnote td.label {
+    width: 0px;
+    padding: 0.3em 0 0.3em 0.5em;
+}
+
+table.footnote td {
+    padding: 0.3em 0.5em;
+}
+
+dl {
+    margin: 0;
+    padding: 0;
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+dl dd {
+    margin-left: 30px;
+}
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+blockquote {
+    margin: 0 0 0 30px;
+    padding: 0;
+}
+
+ul, ol {
+    margin: 10px 0 10px 30px;
+    padding: 0;
+}
+
+pre {
+    background: #EEE;
+    padding: 7px 30px;
+    margin: 15px 0px;
+    line-height: 1.3em;
+}
+
+dl pre, blockquote pre, li pre {
+    margin-left: -60px;
+    padding-left: 60px;
+}
+
+dl dl pre {
+    margin-left: -90px;
+    padding-left: 90px;
+}
+
+tt {
+    background-color: #ecf0f3;
+    color: #222;
+    /* padding: 1px 2px; */
+}
+
+tt.xref, a tt {
+    background-color: #FBFBFB;
+    border-bottom: 1px solid white;
+}
+
+a.reference {
+    text-decoration: none;
+    border-bottom: 1px dotted #004B6B;
+}
+
+a.reference:hover {
+    border-bottom: 1px solid #6D4100;
+}
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+a.footnote-reference {
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+    font-size: 0.7em;
+    vertical-align: top;
+    border-bottom: 1px dotted #004B6B;
+}
+
+a.footnote-reference:hover {
+    border-bottom: 1px solid #6D4100;
+}
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+a:hover tt {
+    background: #EEE;
+}
+
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+
+    div.sphinxsidebar {
+    	display: none;
+    }
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+    div.document {
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+
+    }
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+    div.documentwrapper {
+    	margin-left: 0;
+    	margin-top: 0;
+    	margin-right: 0;
+    	margin-bottom: 0;
+    }
+
+    div.bodywrapper {
+    	margin-top: 0;
+    	margin-right: 0;
+    	margin-bottom: 0;
+    	margin-left: 0;
+    }
+
+    ul {
+    	margin-left: 0;
+    }
+
+    .document {
+    	width: auto;
+    }
+
+    .footer {
+    	width: auto;
+    }
+
+    .bodywrapper {
+    	margin: 0;
+    }
+
+    .footer {
+    	width: auto;
+    }
+
+    .github {
+        display: none;
+    }
+
+
+
+}
+
+
+
+@media screen and (max-width: 875px) {
+
+    body {
+        margin: 0;
+        padding: 20px 30px;
+    }
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+    div.documentwrapper {
+        float: none;
+        background: white;
+    }
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+        margin: 50px -30px -20px -30px;
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+        margin: 0;
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+        display: block;
+        margin: 0;
+        padding: 10px 0 20px 0;
+    }
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+    div.related ul,
+    div.related ul li {
+        margin: 0;
+        padding: 0;
+    }
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+    div.footer {
+        display: none;
+    }
+
+    div.bodywrapper {
+        margin: 0;
+    }
+
+    div.body {
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+        padding: 0;
+    }
+
+    .rtd_doc_footer {
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+    }
+
+    .document {
+        width: auto;
+    }
+
+    .footer {
+        width: auto;
+    }
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+    .footer {
+        width: auto;
+    }
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+    .github {
+        display: none;
+    }
+}
+
+
+/* misc. */
+
+.revsys-inline {
+    display: none!important;
+}
+
+/* Make nested-list/multi-paragraph items look better in Releases changelog
+ * pages. Without this, docutils' magical list fuckery causes inconsistent
+ * formatting between different release sub-lists.
+ */
+div#changelog > div.section > ul > li > p:only-child {
+    margin-bottom: 0;
+}
\ No newline at end of file
diff --git a/_static/basic.css b/_static/basic.css
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--- /dev/null
+++ b/_static/basic.css
@@ -0,0 +1,537 @@
+/*
+ * basic.css
+ * ~~~~~~~~~
+ *
+ * Sphinx stylesheet -- basic theme.
+ *
+ * :copyright: Copyright 2007-2014 by the Sphinx team, see AUTHORS.
+ * :license: BSD, see LICENSE for details.
+ *
+ */
+
+/* -- main layout ----------------------------------------------------------- */
+
+div.clearer {
+    clear: both;
+}
+
+/* -- relbar ---------------------------------------------------------------- */
+
+div.related {
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+    font-size: 90%;
+}
+
+div.related h3 {
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+}
+
+div.related ul {
+    margin: 0;
+    padding: 0 0 0 10px;
+    list-style: none;
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+div.related li {
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+}
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+/* -- sidebar --------------------------------------------------------------- */
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+}
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+    width: 230px;
+    margin-left: -100%;
+    font-size: 90%;
+}
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+div.sphinxsidebar ul {
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+}
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+div.sphinxsidebar ul ul,
+div.sphinxsidebar ul.want-points {
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+    list-style: square;
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+    margin-bottom: 0;
+}
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+}
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+div.sphinxsidebar input {
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+    font-family: sans-serif;
+    font-size: 1em;
+}
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+}
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+div.sphinxsidebar #searchbox input[type="submit"] {
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+}
+
+img {
+    border: 0;
+    max-width: 100%;
+}
+
+/* -- search page ----------------------------------------------------------- */
+
+ul.search {
+    margin: 10px 0 0 20px;
+    padding: 0;
+}
+
+ul.search li {
+    padding: 5px 0 5px 20px;
+    background-image: url(file.png);
+    background-repeat: no-repeat;
+    background-position: 0 7px;
+}
+
+ul.search li a {
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+}
+
+ul.search li div.context {
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+    margin: 2px 0 0 30px;
+    text-align: left;
+}
+
+ul.keywordmatches li.goodmatch a {
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+}
+
+/* -- index page ------------------------------------------------------------ */
+
+table.contentstable {
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+}
+
+table.contentstable p.biglink {
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+}
+
+a.biglink {
+    font-size: 1.3em;
+}
+
+span.linkdescr {
+    font-style: italic;
+    padding-top: 5px;
+    font-size: 90%;
+}
+
+/* -- general index --------------------------------------------------------- */
+
+table.indextable {
+    width: 100%;
+}
+
+table.indextable td {
+    text-align: left;
+    vertical-align: top;
+}
+
+table.indextable dl, table.indextable dd {
+    margin-top: 0;
+    margin-bottom: 0;
+}
+
+table.indextable tr.pcap {
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+}
+
+table.indextable tr.cap {
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+    background-color: #f2f2f2;
+}
+
+img.toggler {
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+    margin-top: 3px;
+    cursor: pointer;
+}
+
+div.modindex-jumpbox {
+    border-top: 1px solid #ddd;
+    border-bottom: 1px solid #ddd;
+    margin: 1em 0 1em 0;
+    padding: 0.4em;
+}
+
+div.genindex-jumpbox {
+    border-top: 1px solid #ddd;
+    border-bottom: 1px solid #ddd;
+    margin: 1em 0 1em 0;
+    padding: 0.4em;
+}
+
+/* -- general body styles --------------------------------------------------- */
+
+a.headerlink {
+    visibility: hidden;
+}
+
+h1:hover > a.headerlink,
+h2:hover > a.headerlink,
+h3:hover > a.headerlink,
+h4:hover > a.headerlink,
+h5:hover > a.headerlink,
+h6:hover > a.headerlink,
+dt:hover > a.headerlink {
+    visibility: visible;
+}
+
+div.body p.caption {
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+}
+
+div.body td {
+    text-align: left;
+}
+
+.field-list ul {
+    padding-left: 1em;
+}
+
+.first {
+    margin-top: 0 !important;
+}
+
+p.rubric {
+    margin-top: 30px;
+    font-weight: bold;
+}
+
+img.align-left, .figure.align-left, object.align-left {
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+    float: left;
+    margin-right: 1em;
+}
+
+img.align-right, .figure.align-right, object.align-right {
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+    float: right;
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+}
+
+img.align-center, .figure.align-center, object.align-center {
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+  margin-left: auto;
+  margin-right: auto;
+}
+
+.align-left {
+    text-align: left;
+}
+
+.align-center {
+    text-align: center;
+}
+
+.align-right {
+    text-align: right;
+}
+
+/* -- sidebars -------------------------------------------------------------- */
+
+div.sidebar {
+    margin: 0 0 0.5em 1em;
+    border: 1px solid #ddb;
+    padding: 7px 7px 0 7px;
+    background-color: #ffe;
+    width: 40%;
+    float: right;
+}
+
+p.sidebar-title {
+    font-weight: bold;
+}
+
+/* -- topics ---------------------------------------------------------------- */
+
+div.topic {
+    border: 1px solid #ccc;
+    padding: 7px 7px 0 7px;
+    margin: 10px 0 10px 0;
+}
+
+p.topic-title {
+    font-size: 1.1em;
+    font-weight: bold;
+    margin-top: 10px;
+}
+
+/* -- admonitions ----------------------------------------------------------- */
+
+div.admonition {
+    margin-top: 10px;
+    margin-bottom: 10px;
+    padding: 7px;
+}
+
+div.admonition dt {
+    font-weight: bold;
+}
+
+div.admonition dl {
+    margin-bottom: 0;
+}
+
+p.admonition-title {
+    margin: 0px 10px 5px 0px;
+    font-weight: bold;
+}
+
+div.body p.centered {
+    text-align: center;
+    margin-top: 25px;
+}
+
+/* -- tables ---------------------------------------------------------------- */
+
+table.docutils {
+    border: 0;
+    border-collapse: collapse;
+}
+
+table.docutils td, table.docutils th {
+    padding: 1px 8px 1px 5px;
+    border-top: 0;
+    border-left: 0;
+    border-right: 0;
+    border-bottom: 1px solid #aaa;
+}
+
+table.field-list td, table.field-list th {
+    border: 0 !important;
+}
+
+table.footnote td, table.footnote th {
+    border: 0 !important;
+}
+
+th {
+    text-align: left;
+    padding-right: 5px;
+}
+
+table.citation {
+    border-left: solid 1px gray;
+    margin-left: 1px;
+}
+
+table.citation td {
+    border-bottom: none;
+}
+
+/* -- other body styles ----------------------------------------------------- */
+
+ol.arabic {
+    list-style: decimal;
+}
+
+ol.loweralpha {
+    list-style: lower-alpha;
+}
+
+ol.upperalpha {
+    list-style: upper-alpha;
+}
+
+ol.lowerroman {
+    list-style: lower-roman;
+}
+
+ol.upperroman {
+    list-style: upper-roman;
+}
+
+dl {
+    margin-bottom: 15px;
+}
+
+dd p {
+    margin-top: 0px;
+}
+
+dd ul, dd table {
+    margin-bottom: 10px;
+}
+
+dd {
+    margin-top: 3px;
+    margin-bottom: 10px;
+    margin-left: 30px;
+}
+
+dt:target, .highlighted {
+    background-color: #fbe54e;
+}
+
+dl.glossary dt {
+    font-weight: bold;
+    font-size: 1.1em;
+}
+
+.field-list ul {
+    margin: 0;
+    padding-left: 1em;
+}
+
+.field-list p {
+    margin: 0;
+}
+
+.optional {
+    font-size: 1.3em;
+}
+
+.versionmodified {
+    font-style: italic;
+}
+
+.system-message {
+    background-color: #fda;
+    padding: 5px;
+    border: 3px solid red;
+}
+
+.footnote:target  {
+    background-color: #ffa;
+}
+
+.line-block {
+    display: block;
+    margin-top: 1em;
+    margin-bottom: 1em;
+}
+
+.line-block .line-block {
+    margin-top: 0;
+    margin-bottom: 0;
+    margin-left: 1.5em;
+}
+
+.guilabel, .menuselection {
+    font-family: sans-serif;
+}
+
+.accelerator {
+    text-decoration: underline;
+}
+
+.classifier {
+    font-style: oblique;
+}
+
+abbr, acronym {
+    border-bottom: dotted 1px;
+    cursor: help;
+}
+
+/* -- code displays --------------------------------------------------------- */
+
+pre {
+    overflow: auto;
+    overflow-y: hidden;  /* fixes display issues on Chrome browsers */
+}
+
+td.linenos pre {
+    padding: 5px 0px;
+    border: 0;
+    background-color: transparent;
+    color: #aaa;
+}
+
+table.highlighttable {
+    margin-left: 0.5em;
+}
+
+table.highlighttable td {
+    padding: 0 0.5em 0 0.5em;
+}
+
+tt.descname {
+    background-color: transparent;
+    font-weight: bold;
+    font-size: 1.2em;
+}
+
+tt.descclassname {
+    background-color: transparent;
+}
+
+tt.xref, a tt {
+    background-color: transparent;
+    font-weight: bold;
+}
+
+h1 tt, h2 tt, h3 tt, h4 tt, h5 tt, h6 tt {
+    background-color: transparent;
+}
+
+.viewcode-link {
+    float: right;
+}
+
+.viewcode-back {
+    float: right;
+    font-family: sans-serif;
+}
+
+div.viewcode-block:target {
+    margin: -1px -10px;
+    padding: 0 10px;
+}
+
+/* -- math display ---------------------------------------------------------- */
+
+img